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Job Exceeds Queue Resource Limits

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The following two files (.err, .out) are updating Logs/cl2d_run_001.err Logs/cl2d_run_001.out but the following one (.log) is not. However, after I enter 48 there, I got the following error a few seconds afterwards. =========================== ** Submiting to queue: 'qsub Runs/cl2d_run_001.job' qsub: submit error (Job exceeds queue resource limits MSG=cannot Next message: [torqueusers] Beginner Problem: MSG=cannot locate feasible nodes Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] More information about the torqueusers mailing list On Thu, Apr 16, 2015 at 11:07 PM, Steven Chou wrote: > Hi Jose Miguel, > Thank you very much for your fast response! > I'm using "Align+Classify => CL2D". have a peek here

What > you can > do is to set the number of MPI = nodes x cores, but you need to make sure > that you queue system will allocate them As you mentioned, it > seems that this GUI does not have a place to allow me to > enter the "Number of threads". > The MPI of our cluster (24 If I request more than 24 processes, the jobs will stopped with the following error: ==================================== ** Submiting to queue: 'qsub Runs/cl2d_run_001.job' qsub: submit error (Job exceeds queue resource limits MSG=cannot cBio @ MSKCC member jchodera commented Oct 1, 2014 Actually, I think the correct syntax may be: #PBS -l procs=32,gpus=1:shared danielparton commented Oct 1, 2014 Error message again: $ qsub simimp-TKs.tcsh a fantastic read

Job Exceeds Queue Resource Limits

You seem to have CSS turned off. Am I right? > > However, after I enter 48 there, I got the following error a few seconds > afterwards. > =========================== > ** Submiting to queue: 'qsub Runs/cl2d_run_001.job' > I change nodesfile np values 4,show the same error information. All Rights Reserved.

Please enable cookies. If there are multiple cores per node, and the number of workers per job exceeds the number of physical nodes, you will need to modify the communicatingSubmitFcn.m file (pbsNonSharedParallelSubmitFcn.m in older We're trying to figure out how to request 32 gpus for an MPI job, where the GPUs can be on any node(s). @hocks suggested the syntax for this was #PBS -l I guess here the difference should be how Maui and PSB handle that, I'm not sure.

Close × Select Your Country Choose your country to get translated content where available and see local events and offers. Qsub If I request 24 or less processes in XMIPP's GUI, the jobs can be run successfully. In this case, I should be > able to enter "48" in "number of MPI processes" section. > Am I right? > > However, after I enter 48 there, I got If you are at an office or shared network, you can ask the network administrator to run a scan across the network looking for misconfigured or infected devices.

how can i do it and we will use np is 4.Thanksyang_______________________________________________torqueusers mailing listhttp://www.supercluster.org/mailman/listinfo/torqueusers_______________________________________________torqueusers mailing listhttp://www.supercluster.org/mailman/listinfo/torqueusers Brock Palen 2008-01-17 22:16:16 UTC PermalinkRaw Message Oh besure its ran on one of your If you send me an example of a submit > file, maybe I can help > you to configure the Xmipp config.py file to submit the proper script the > your Apply Today MATLAB Academy New to MATLAB? At the time of this writing, the following checks are implemented Memory Request Verifies that the job requests memory, and rejects if it does not Job event notifications Verifies that the

Qsub

How can my parallel jobs take advantage of the additional cores and worker licenses available? 0 Comments Show all comments Tags No tags are associated with this question. Completing the CAPTCHA proves you are a human and gives you temporary access to the web property. Job Exceeds Queue Resource Limits Products Parallel Computing Toolbox Related Content 1 Answer MathWorks Support Team (view profile) 13,674 questions 13,674 answers 13,673 accepted answers Reputation: 2,682 Vote0 Link Direct link to this answer: https://www.mathworks.com/matlabcentral/answers/93191#answer_102539 Answer Sign in to comment Contact GitHub API Training Shop Blog About © 2016 GitHub, Inc.

What >>>> you can >>>> do is to set the number of MPI = nodes x cores, but you need to make >>>> sure >>>> that you queue system will allocate navigate here Compilation and installation ran without an > >> >problems > >> >and submission of simple test jobs ( $ echo "sleep 30" | qsub ) > >also > >> >ran > I change nodes file np values 4,show the same error information. Ken Previous message: [Mauiusers] cannot locate feasible nodes Next message: [Mauiusers] New Moab HPC Suite 7.1 Messages sorted by: [ date ] [ thread ] [ subject ] [ author ]

Sorzano - 2015-04-21 06:11:09 Attachments: Message as HTML Dear Steven, let us analyze the changes needed and we'll go over them. Last Updated Wednesday, Oct 26 09:40 am 2016 Levi will teach the 3 credit Scientific Computing Course again Winter Semester. We have a cluster with 24 compute nodes, and each node has 20 processors. Check This Out What can I do to prevent this in the future?

And the GUI is also updating well in the "Summary" section. If I request 24 or less processes in XMIPP's GUI, the jobs can be run successfully. nedit Runs/cl2d_run_001.job & # For the whole file see the end of this email # original ========== #PBS -l nodes=48:ppn=1 ========== # modified ========== #PBS -l nodes=24:ppn=2 ========== An then I

If you send me an example of a submit >> file, maybe I can help >> you to configure the Xmipp config.py file to submit the proper script the >> your

What you can > do is to set the number of MPI = nodes x cores, but > you need to make sure > that you queue system will allocate them it seem torque default np is 2. for error return 255, > > Job requirement specification: > nodes=2:xxx=27 > is not a valid request. > "xxx" is not an acceptable special property, > only ppn= , procs= and Please don't fill out this field.

There are also discussions about this error however I didn't find a clear solution. I'm using "Align+Classify => CL2D". All Rights Reserved. this contact form how can i do it and we will use np is 4.Thanksyang zhyang at lzu.edu.cn () 2008-01-17 20:18:10 UTC PermalinkRaw Message -----????-----????: 2008-01-18 10:52:00??: Re: [torqueusers] qsub: Job exceeds queue resource

All jobs using the "bigmem" nodes are limited to 5 days. -------------------------------------------------------------------------------- If you believe this is in error, feel free to open a support ticket via our website at https://marylou.byu.edu/ticket/. From: Jose Miguel de la Rosa Trevin - 2015-04-16 19:57:32 Attachments: Message as HTML Dear Steven, Usually the number of cores is specified in the 'Number of threads' entry in I had a ':' instead of ',' between the 'procs' and 'gpus' fields. [torqueusers] Beginner Problem: MSG=cannot locate feasible nodes : Suggested error message change.